Articles

Articles

Galera-Prat A, Moraïs S, Vazana Y, Bayer EA, Carrión-Vázquez M. The cohesin module is a major determinant of cellulosome mechanical stability. J Biol Chem. 2018 Mar 22. pii: jbc.RA117.000644. doi: 10.1074/jbc.RA117.000644.

Galera-Prat A, Pantoja-Uceda D, Laurents DV, Carrión Vázquez M. Solution conformation of a cohesin module and its scaffoldin linker from a prototypical cellulosome. Arch Biochem Biophys. 2018 Feb 24;644:1-7. doi: 10.1016/j.abb.2018.02.016. [Epub ahead of print] PubMed PMID: 29486159.

Chwastyk M, Vera AM, Galera-Prat A, Gunnoo M, Thompson D, Carrión-Vázquez M, Cieplak M. Non-local effects of point mutations on the stability of a protein module. J Chem Phys. 2017 Sep 14;147(10):105101. doi: 10.1063/1.4999703. PubMed PMID: 28915745.

Vera AM, Carrión-Vázquez M. Direct Identification of Protein-Protein Interactions by Single-Molecule Force Spectroscopy. Angew Chem Int Ed Engl. 2016 Nov 2;55(45):13970-13973. doi: 10.1002/anie.201605284. Epub 2016 Oct 13. PubMed PMID: 27735106.

Wojciechowski M, Cieplak M. Dual binding mode in cohesin-dockerin complexes as assessed through stretching studies. J Chem Phys. 2016 Oct 7;145(13):134102. PubMed PMID: 27782410.

Oroz J, Bruix M, Laurents DV, Galera-Prat A, Schönfelder J, Cañada FJ, Carrión-Vázquez M. The Y9P Variant of the Titin I27 Module: Structural Determinants of Its Revisited Nanomechanics. Structure. 2016 Apr 5;24(4):606-616. doi: 10.1016/j.str.2016.02.016. Epub 2016 Mar 24. PubMed PMID: 27021163.

File: Oroz et al., 2016.pdf  

 

Hervás R, Li L, Majumdar A, Fernández-Ramírez Mdel C, Unruh JR, Slaughter BD, Galera-Prat A, Santana E, Suzuki M, Nagai Y, Bruix M, Casas-Tintó S, Menéndez M, Laurents DV, Si K, Carrión-Vázquez M. Molecular Basis of Orb2 Amyloidogenesis and Blockade of Memory Consolidation. PLoS Biol. 2016 Jan 26;14(1):e1002361. doi: 10.1371/journal.pbio.1002361. eCollection 2016 Jan. PubMed PMID: 26812143; PubMed Central PMCID: PMC4727891.

File: Hervás et al., 2016.pdf  

 

Gunnoo M, Cazade PA, Galera-Prat A, Nash MA, Czjzek M, Cieplak M, Alvarez B, Aguilar M, Karpol A, Gaub H, Carrión-Vázquez M, Bayer EA, Thompson D. Nanoscale Engineering of Designer Cellulosomes. Adv Mater. 2016 Jul;28(27):5619-47. doi: 10.1002/adma.201503948. Epub 2016 Jan 7. PubMed PMID: 26748482.

Gómez-Sicilia À, Sikora M, Cieplak M, Carrión-Vázquez M. 2015. An Exploration of the Universe of Polyglutamine Structures. PLoS Comput Biol. 2015 Oct 23;11(10):e1004541. doi: 10.1371/journal.pcbi.1004541. eCollection 2015 Oct.

File: Gómez-Sicilia et al, 2015.pdf  

 

Méndez-Gómez HR, Galera-Prat A, Meyers C, Chen W, Singh J, Carrión-Vázquez M, Muzyczka N. Transcytosis in the blood-cerebrospinal fluid barrier of the mouse brain with an engineered receptor/ligand system. Mol Ther Methods Clin Dev. 2015 Oct 7;2:15037. doi: 10.1038/mtm.2015.37. eCollection 2015.

Mompeán M, Hervás R, Xu Y, Tran TH, Guarnaccia C, Buratti E, Baralle F, Tong L, Carrión-Vázquez M, McDermott AE, Laurents DV. Structural Evidence of Amyloid Fibril Formation in the Putative Aggregation Domain of TDP-43.J Phys Chem Lett. 2015 Jul 2;6(13):2608-15. doi: 10.1021/acs.jpclett.5b00918. Epub 2015 Jun 22.

Ramos-Martín, F., Hervás, R., Carrión Vázquez, M & Laurents, D.V. (2014). NMR spectroscopy reveals that polyglutamine binding peptide 1 adopts a preferred conformation with a defined hydrophobic cluster. Arch. Biochem. Biophys. 558:104-110.

M. Wojciechowski, P. Szymczak, M. Carrion-Vazquez, and M. Cieplak. 2014. Protein unfolding by biological unfoldases: insights from modeling. Biophys. J.doi:10.1016/j.bpj.2014.07.035

File: Wojciechowski et al, 2014.pdf  

 

Ramos-Martín, F., Hervás, R., Carrión Vázquez, M & Laurents, D.V. (2014). NMR spectroscopy reveals that polyglutamine binding peptide 1 adopts a preferred conformation with a defined hydrophobic cluster. Arch. Biochem. Biophys. 558:104-110.

File: Ramos-Martin et al_2014.pdf  

 

Wojciechowski, M., Szymczak, P., Carrión-Vázquez, M., and Cieplak, M. (2014). Protein unfolding by biological unfoldases: insights from modeling. Biophys. J. 107:1661-1668.

File: Wojciechowski et al 2014.pdf  

 

de Pablo P.J. and Carrión-Vázquez, M. (2014). Imaging biological samples with atomic force microscopy. Cold Spring Harb. Protoc.. 2014:167-177. doi: 10.1101/pdb.top080473.

File: de Pablo & Carrion-Vazquez _2015.pdf  

 

Chwastyk, M., Galera–Prat, A., Sikora, M., Gómez-Sicilia, À., Carrión-Vázquez, M. and Cieplak, M. (2013).Theoretical tests of the mechanical protection strategy in protein nanomechanics. Proteins. 82(5):717-26

File: Chwastyk at al 2014.pdf  

 

Valbuena A., Vera, A.M., Oroz, J. and Carrión-Vázquez, M. (2012). Mechanical properties of β-catenin revealed by single-molecule techniques. Biophys. J. 103:1744-1752.

File: Valbuena et al 2012.pdf  

 

Oroz J., Hervás, R., Valbuena A. & Carrión-Vázquez, M. (2012). Unequivocal single-molecule force spectroscopy of intrinsically disordered proteins. Methods Mol. Biol. 896:71-87.

File: Oroz_et_al_2012.pdf  

 

Hervás, R., Oroz J., Galera-Prat, A., Goñi, O., Valbuena A., Vera, A.M., Gómez-Sicilia, A., Losada-Urzáiz, F., Uversky, V.N., Menéndez, M., Laurents, D. Bruix, M. and Carrión-Vázquez, M. (2012). Common features at the start of the neurodegeneration cascade. PLoS Biology 10: e1001335. doi: 10.1371/journal.pbio.1001335. Epub 2012 May 29.

File: Hervás at al 2012.pdf  

 

Oroz J., Hervás, R. and Carrión-Vázquez, M.(2012). Unequivocal single-molecule force spectroscopy of proteins by AFM using pFS vectors. Biophys. J. 102: 682-690.

File: Oroz et al 2012.pdf  

 

Oroz J., Valbuena A., Vera, A.M., Mendieta, J. Gómez-Puertas, P., and Carrión-Vázquez, M. (2011). Nanomechanics of the cadherin ectodomain: “canalization” by Ca2+ binding results in a new mechanical element. J. Biol. Chem. 286:9405-9418.

File: Oroz et al 2011.pdf  

 

Galera-Prat, A., Gómez-Sicilia, A., Oberhauser A.F, Cieplak, M. & Carrión-Vázquez, M. (2010). Understanding biology by stretching proteins: recent progress. Curr. Opin. Str. Biol. 20: 63-69.

File: Galera-Prat et al 2010.pdf  

 

Valbuena A., Oroz J., Hervás, R., Vera, A.M., Rodriguez, D., Menéndez, M., Sulkowska,J.I., Cieplak, M. and Carrión-Vázquez, M. (2009). On the remarkable mechanostability of scaffoldins and the mechanical clamp motif. Proc. Natl. Acad. Sci USA 106:13791-13796

File: Valbuena et al 2009.pdf  

 

Oberhauser, A.F, and Carrión-Vázquez, M. (2008). Mechanical biochemistry of proteins one molecule at a time. J. Biol. Chem. 283, 6617-6621.

File: Oberhauser et al 2008.pdf  

 

Valbuena A., Oroz J., Vera, A.M., Gimeno, A., Gómez-Herrero, J. and Carrión-Vázquez, M. (2007). Quasi-simultaneous imaging/pulling analysis of polyprotein molecules by AFM. Rev. Sci. Instrum. 78, 113707.

Ainavarapu, S.R.K., Brujic J., Huang, H.H., Wiita, A.P., Lu, H., Li, L., Walther, K.A., Carrion-Vazquez, M., Li, H., and J. M. Fernandez (2007). Contour length and refolding rate of a small protein controlled by engineered disulfide bonds. Biophys. J. 92, 225-233.

File: Ainavaparu et al 2007.pdf  

 

Carrión-Vázquez, M., Li, H., Lu, H.,Marszalek, P.E., Oberhauser A.F. and J.M. Fernández (2003). The mechanical stability of ubiquitin is linkage dependent. Nature Str. Biol. 10, 738-743.

File: Carrión-Vázquez et al 2003.pdf  

 

Li, H., Linke, W. A., Oberhauser, A.F., Carrión-Vázquez, M., Kerkvliet, J.G., Lu, H., Marszalek, P.E., and J.M. Fernández (2002). Reverse engineering of the giant muscle protein titin. Nature 418,998-1002.

File: Li at al 2002.pdf  

 

Oberhauser, A.F., Badilla-Fernández, C., Carrión-Vázquez, M., and J.M. Fernández (2002). The mechanical hierarchies of fibronectin observed with single-molecule AFM. J. Mol. Biol. 319, 433-447.

File: Oberhauser et al 2002.pdf  

 

Li, H., Oberhauser, A.F., Redick, S., Carrión-Vázquez, M., Erickson, H.P., and J.M. Fernández (2001). Multiple conformations of PEVK proteins detected by single-molecule techniques. Proc. Natl. Acad. Sci USA 98, 10682-10686.

File: Li et al 2001.pdf  

 

Oberhauser, A.F., Hansma, P. Carrión-Vázquez, M., and J.M. Fernández (2001). Stepwise unfolding events in titin under the force-clamp AFM. Proc. Natl. Acad. Sci USA. 98,468-472.

File: Oberhauser et al 2001.pdf  

 

Carrión-Vázquez, M., Oberhauser, A.F., Fisher, T.E., Marszalek, P.E., Li, H. and J.M. Fernández (2000). Mechanical design of proteins studied by single-molecule force spectroscopy and protein engineering. Prog. in Biophys. Mol. Biol. 74, 63-91.

File: Carrión-Vázquez et al 2000.pdf  

 

Li, H., Carrión-Vázquez, M., Oberhauser, A.F., Marszalek, P.E., and J.M. Fernández (2000). Point mutations alter the mechanical stability of immunoglobulin modules. Nature Struct. Biol. 7, 1117-1120.

File: Li et al 2000.pdf  

 

Fisher, T.E., Carrión-Vázquez, M. and J.M. Fernández (2000). Intracellular Ca2+ channel immunoreactivity in neuroendocrine axon terminals. FEBS Lett. 482,131-138.

File: Fisher et al 2000.pdf  

 

Fisher, T.E., Carrión-Vázquez, M., Oberhauser, A.F., Marszalek, P.E., Li, H. and J.M. Fernández (2000). Single molecule force spectroscopy of modular proteins in the nervous system. Neuron 27, 435-446

File: Fisher et al 2000b.pdf  

 

Carrión-Vázquez, M., Oberhauser, A.F., Marszalek, P.E., and J.M. Fernández (1999). Atomic force microscopy captures length phenotypes in single proteins. Proc. Natl. Acad. Sci. USA 96, 11288-11292.

File: Carrión-Vázquez 1999.pdf  

 

Fisher, T.E., Oberhauser, A.F., Carrión-Vázquez, M., Marszalek, P.E., and J.M. Fernández (1999). The study of protein mechanics with the atomic force microscope. Trends in Biochem. Sci. 24,379-384.

File: Fisher et al 1999.pdf  

 

Fisher, T.E., Marszalek, P.E, Oberhauser, A.F., Carrión-Vázquez, M., and J.M. Fernández (1999). The micro-mechanics of single molecules studied with atomic force microscopy. J. Physiol. (Lond.) 520, 5-14.

File: Fisher et al 1999b.pdf  

 

Oberhauser, A.F., Marszalek, P.E., Carrión-Vázquez, M., and J.M. Fernández (1999). Single protein misfolding events captured by AFM. Nature Str. Biol. 6, 1025-1028.

File: Oberhauer et al 1999.pdf  

 

Carrión-Vázquez, M., Oberhauser, A.F., Fowler, S.B., Marszalek, P.E., Broedel, S.E., Clarke, J. and J.M. Fernández (1999). Mechanical and chemical unfolding of a single protein: a comparison. Proc. Natl. Acad. Sci. USA 96, 3694-3699.

File: Carrión-Vázquez et al 1999.pdf  

 

Marszalek, P.E., Lu, H., Li, H., Carrión-Vázquez, M., Oberhauser, A.F., Schulten K., and J.M. Fernández (1999). Mechanical unfolding intermediates in titin modules. Nature 402, 100-103.

File: Marszalek at al 1999.pdf  

 

Carrión-Vázquez, M., Fernández, A. M., Chowen, J M. & M. Nieto-Sampedro (1998). Brain Ac39/physophilin: cloning, coexpression and colocalization with synaptophysin. Eur. J. Neurosci. 10, 1153-1166.

File: Carrión-Vázquez at al 1998.pdf  

 

Robinson, I., Yamada, M., Carrión-Vázquez, M., Lennon, V., and J. M. Fernández (1996). Specialized release zones in chromaffin cells examined with pulsed-laser imaging. Cell Calcium 20(2), 181-201.

File: Robinson et al 1996.pdf  

 

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